PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_196130_qeeq.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 361aa    MW: 39651.7 Da    PI: 9.4206
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_196130_qeeq.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.19.8e-062993311754
                         HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                         N  ++  r ++P+ +      K++Ka+i + A++YIk+L
  Bv8_196130_qeeq.t1 299 NRHLFAFRAVVPNiS------KMDKASIIKDAINYIKEL 331
                         778888888999855......****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF022221.5E-18355IPR003135ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
Gene3DG3DSA:3.30.470.203.2E-18455IPR013816ATP-grasp fold, subdomain 2
SuperFamilySSF560591.46E-13658No hitNo description
PROSITE profilePS5097512.744971IPR011761ATP-grasp fold
SuperFamilySSF512461.02E-968112IPR011054Rudiment single hybrid motif
Gene3DG3DSA:3.30.470.202.0E-769116IPR013816ATP-grasp fold, subdomain 2
Gene3DG3DSA:3.40.50.77001.1E-67123263IPR000031PurE domain
SMARTSM010011.3E-86124273IPR000031PurE domain
PfamPF007313.4E-62125263IPR000031PurE domain
SuperFamilySSF522552.49E-60125266IPR000031PurE domain
HamapMF_0192930.313126277IPR000031PurE domain
TIGRFAMsTIGR011624.2E-62126265IPR000031PurE domain
PROSITE profilePS5088811.287282331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.53E-6291336No hitNo description
SuperFamilySSF474591.96E-9292346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.9E-5294337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-8299348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006189Biological Process'de novo' IMP biosynthetic process
GO:0005524Molecular FunctionATP binding
GO:0046872Molecular Functionmetal ion binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MESKKLATDV AHKAVSSLEG AGVFAVELFL TEAGEILLNE VAPRPHNSGH HTIESWGTWF  60
HFSSQTYEKK SNCARASVHW YDKSEMKRQR KMGHITIVGS SMGIMEGHLK SLLKQDKIDG  120
AISVRVGIIM GSDSDLPVMK DASRILDMFG VEHEVRIVSP HRTPEMMFTY AKSAWERGIQ  180
VIIAGAGGAA HLPGMVAALT PVPVIVVPVR GSSMDGLDSL LSIVQMPRGV PVATVAINNA  240
KNAGLLALRM LGVGDSNIKS RLRILTFEDT ISSYYDYDSS SPDGSASSIA SKNIVSERNR  300
HLFAFRAVVP NISKMDKASI IKDAINYIKE LHEQERRIKA DISDLEYRKS KSNWLKLLGC  360
H
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1o4v_A6e-6212526315153phosphoribosylaminoimidazole mutase PurE
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010667304.11e-150PREDICTED: LOW QUALITY PROTEIN: phosphoribosylaminoimidazole carboxylase, chloroplastic-like
SwissprotP551951e-111PUR6_VIGAC; Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment)
TrEMBLA0A0J8EJA40.0A0A0J8EJA4_BETVU; Uncharacterized protein
STRINGSolyc11g006340.1.11e-123(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.21e-17bHLH family protein